Step 4: Silicone the Intake Manifold.
I put a bead of RTV on the inside of the black rubber gasket and on the outside, just to make sure no leaks.
Step 5: Install the blower
It helps if you have someone to help you cause the blower is kinda heavy, however I did install it alone. As your sliding it back make sure to connect the line in the back to the barbed fitting. Make sure you slide it under the two back bolts and line up the front. I went ahead and put the front two bolts in hand tight just to lock it into place. Get on the bolts on and threaded hand tight. Starting from the middle two bolts torque them two 25FTLBS working your way out criss crossing. When you get to the back driver side bolt, it becomes tricky. I laod on top of the blower and stick your right hand under the blower where the fuel rail would go with a 10MM ratcheting wrench. I then placed my left hand around the back side of the blower to feel for the bolt. I could not hold the bolt but I could feel where it was. Now if you left the space just right it will have enough pressure on it you can ratchet it. If not you will need to turn it a couple of times with the wrench until it can ratchet. I tightened it up real good probably even more than 25LBS. I let the RTV dry overnight. Some say it's not necessary and will dry allot faster than that, I did it just to be safe. Also you can go ahead and fill the blower with the supplied oil. The oil should reach about the middle of the fill window.
Step 6: Fuel Rails
These are tricky because of the new inlet. Whipple has provide you with a new bolt for the back driver side fuel rail. I put the passenger side on first which is easy, then I did the driver side. On the driver side you will need to pull the back fuel injector out and place it in the hole, but not all the way and not straight up. Just barely put it in and lean it towards the front of the car. Then place the fuel rail on it and slide it back into place. Use the new bolt on the back one and the stock bolts on the rest.
Step 7: Install the EGR Valve
I got the line threaded first and make sure the header side is still loose. Then bolt the EGR on. After you have it secure, tighten up the line on both sides. I also used RTV on the EGR adaptor that bolts to the supercharger, and used the stock metal gasket between the EGR and the adaptor. Plug in the vacuum lines, Whipple has supplied you with a plug that blocks off the long line coming that used to go around to the stock bypass actuator.